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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792868.1_cds_XP_016514872.1_2650
CDS Infomation

[gene=LOC107831601] [db_xref=GeneID:107831601] [protein=vacuolar cation/proton exchanger 3-like] [protein_id=XP_016514872.1] [location=complement(join(14126..14181,14551..14641,14872..14988,15418..15471,15559..15675,15776..15907,16503..16721,16918..17114,17651..17679,17791..17858,18571..18861))] [gbkey=CDS]
Sequence

ATGTCTTCATCATCAGCACCAGCAGCAGAAACATGGCTCTTAGAAAATGGAAATATTAAA
CCCTTAAGCAAAGAAATGAGGCACGGACATGGCCGTAGCCGAACAGCTCATAACGTGTCC
TCTGCATCTCTGAGAAAAAAATCCGATCTTACCCTTGTCCGTAAAGTACCTTGCAGCATT
GTTAGAGATGTTCTTGCTAATATTCAAGAGGTCATTTTAGGAACTAAACTTTTTGTGCTC
TTCATTGCTGTCCCTTTTGCCATTCTTGCTCATTACCAAAACTTTGGAAGATCATGGGTT
TTTGGATTGAGTTTAGTTGGACTCACACCATTGGCTGAACGGATCAGCTTTTTGACAGAA
CAAATAGCTTTCTTCACTGGTCCAACAGTTGGAGGGCTTCTAAATGCAACGTGTGGGAAC
GCAACGGAACTGATAATAGCAATTCTTGCTCTGACGCAACACAAAGTAGATGTTGTGAAA
TACTCCCTATTGGGCTCTATACTTTCAAACCTTCTTCTGGTTCTTGGCACCTCCCTCTTC
TGTGGTGGCATTGCTAATCTCTCCAAGGAACAAAAATATGACAGGAAACAAGCAGATGTG
AACTCACTGCTTTTGCTGTTGGGACTATTATGTCATATGCTACCATTGATGTTTCGTTAT
GCTGGAGTTGGAGAATCTGTTGCTGTTACAGCTAAAGCAACTCTTCTTCTATCAAGAGTC
AGCTGCATTGTCATGCTCATTGCCTACCTCGGTTACCTAGTTTTCCAGTTGTGGACCCAC
CGCCAACTTTTTGACGCACAAGCTGAAGAAAATGAAGATGATGACACAGTCGAAGAAGAG
GAAGCAGTGCTTGGATTCTGGAGTGCATTTGCATGGTTGGTAGGAATGACTGCAGTTGTT
GCTCTATTATCTGAATATGTTGTTGGTACTATTGAGGCAGCATCAGATTCTTGGGGAATC
TCAGTGAGCTTCATCAGTGTTATTTTGTTACCAATTGTTGGAAATGCTGCAGAACATGCT
GGCGCTGTCATTTTTGCTTTCAAAAATAAATTGGACATTTCTTTGGGAGTTGCCCTAGGC
TCAGCAACTCAAATTGCCATGTTTGTGGTTCCATTAAGTGTTATTGTCGCATGGATTATT
GGTGAGAGAATGGATCTTGATTTTAGTCTTCTTGAGACTGGCTCCCTCGGTTTGGCAATA
ATTGTCACAGCTTTCACTTTACAGGATGGAACATCACATTATATCAAAGGATTAGTCCTC
CTGCTCTGTTACATTGTCATTGGAACATGTTTTTTCTTCTACAACAGACCACAAAACCAA
CCAAATGGTATCAACTTTGGCTCATCAACTGGTGGAATCGTAAGAGTTTGA

Peptide Sequence

PEP ID

XP_016514872.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like [Nicotiana tabacum]
Sequence

MSSSSAPAAETWLLENGNIKPLSKEMRHGHGRSRTAHNVSSASLRKKSDLTLVRKVPCSI
VRDVLANIQEVILGTKLFVLFIAVPFAILAHYQNFGRSWVFGLSLVGLTPLAERISFLTE
QIAFFTGPTVGGLLNATCGNATELIIAILALTQHKVDVVKYSLLGSILSNLLLVLGTSLF
CGGIANLSKEQKYDRKQADVNSLLLLLGLLCHMLPLMFRYAGVGESVAVTAKATLLLSRV
SCIVMLIAYLGYLVFQLWTHRQLFDAQAEENEDDDTVEEEEAVLGFWSAFAWLVGMTAVV
ALLSEYVVGTIEAASDSWGISVSFISVILLPIVGNAAEHAGAVIFAFKNKLDISLGVALG
SATQIAMFVVPLSVIVAWIIGERMDLDFSLLETGSLGLAIIVTAFTLQDGTSHYIKGLVL
LLCYIVIGTCFFFYNRPQNQPNGINFGSSTGGIVRV

Transcript Sequence

Gene sequence data has not been registered.